Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 MFAP1P1-201ENST00000442257 1255 ntBASIC14.43□□□□□ -0.1
NPIPB3Q92617 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 CD177P1-201ENST00000606252 935 ntBASIC14.43□□□□□ -0.1
NPIPB3Q92617 LINC00896-202ENST00000609602 2128 ntBASIC14.43□□□□□ -0.1
NPIPB3Q92617 AL359736.2-201ENST00000621992 437 ntBASIC14.43□□□□□ -0.1
NPIPB3Q92617 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 AC096733.2-201ENST00000609937 1394 ntBASIC14.43□□□□□ -0.1
NPIPB3Q92617 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
NPIPB3Q92617 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC14.43□□□□□ -0.1
NPIPB3Q92617 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 SRI-203ENST00000419179 1307 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 KRT8P50-201ENST00000562022 1438 ntBASIC14.42□□□□□ -0.1
NPIPB3Q92617 AL135905.2-201ENST00000584934 1404 ntBASIC14.42□□□□□ -0.1
NPIPB3Q92617 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 OR6D1P-203ENST00000641209 4860 ntBASIC14.42□□□□□ -0.1
NPIPB3Q92617 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC14.42□□□□□ -0.1
NPIPB3Q92617 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
NPIPB3Q92617 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 STK4-201ENST00000372801 2038 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 EML3-212ENST00000494176 2901 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 EML3-216ENST00000529309 2909 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 PHGDH-209ENST00000641074 1780 ntBASIC14.41□□□□□ -0.1
NPIPB3Q92617 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
NPIPB3Q92617 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
NPIPB3Q92617 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.41□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms