Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 MIR1238-201ENST00000408483 83 ntBASIC17.86■□□□□ 0.45
CPSF7Q8N684 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.86■□□□□ 0.45
CPSF7Q8N684 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
CPSF7Q8N684 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 AL390955.1-201ENST00000428694 934 ntBASIC17.85■□□□□ 0.45
CPSF7Q8N684 AC116562.2-201ENST00000507042 360 ntBASIC17.85■□□□□ 0.45
CPSF7Q8N684 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 KRT8P9-201ENST00000558927 1449 ntBASIC17.85■□□□□ 0.45
CPSF7Q8N684 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 AL031985.4-201ENST00000642138 673 ntBASIC17.85■□□□□ 0.45
CPSF7Q8N684 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CPSF7Q8N684 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.85■□□□□ 0.45
CPSF7Q8N684 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 AL096828.2-201ENST00000567259 1965 ntBASIC17.84■□□□□ 0.45
CPSF7Q8N684 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
CPSF7Q8N684 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.84■□□□□ 0.45
CPSF7Q8N684 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
CPSF7Q8N684 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.45
CPSF7Q8N684 RCC2P3-201ENST00000418112 1537 ntBASIC17.83■□□□□ 0.45
CPSF7Q8N684 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms