Protein–RNA interactions for Protein: Q8N556

AFAP1, Actin filament-associated protein 1, humanhuman

Predictions only

Length 730 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AFAP1Q8N556 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
AFAP1Q8N556 MCCD1P2-201ENST00000423228 335 ntBASIC27.21■■□□□ 1.95
AFAP1Q8N556 CYMP-203ENST00000474680 1263 ntBASIC27.21■■□□□ 1.95
AFAP1Q8N556 YBX1P5-201ENST00000509441 847 ntBASIC27.21■■□□□ 1.95
AFAP1Q8N556 RFPL4AP1-201ENST00000530883 850 ntBASIC27.21■■□□□ 1.95
AFAP1Q8N556 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC27.21■■□□□ 1.95
AFAP1Q8N556 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
AFAP1Q8N556 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
AFAP1Q8N556 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
AFAP1Q8N556 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC27.21■■□□□ 1.95
AFAP1Q8N556 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC27.21■■□□□ 1.95
AFAP1Q8N556 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC27.2■■□□□ 1.95
AFAP1Q8N556 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
AFAP1Q8N556 AL049812.1-201ENST00000432563 2267 ntBASIC27.2■■□□□ 1.95
AFAP1Q8N556 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC27.2■■□□□ 1.95
AFAP1Q8N556 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
AFAP1Q8N556 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC27.2■■□□□ 1.95
AFAP1Q8N556 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
AFAP1Q8N556 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
AFAP1Q8N556 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 SRP19-202ENST00000445150 833 ntTSL 2 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 MIR3197-201ENST00000582241 73 ntBASIC27.2■■□□□ 1.94
AFAP1Q8N556 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
AFAP1Q8N556 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
AFAP1Q8N556 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC27.2■■□□□ 1.94
AFAP1Q8N556 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 AL499627.1-201ENST00000569373 2188 ntBASIC27.19■■□□□ 1.94
AFAP1Q8N556 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC27.19■■□□□ 1.94
AFAP1Q8N556 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC27.19■■□□□ 1.94
AFAP1Q8N556 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
AFAP1Q8N556 AC007952.6-201ENST00000573168 2673 ntBASIC27.18■■□□□ 1.94
AFAP1Q8N556 AC003957.1-201ENST00000625108 2673 ntBASIC27.18■■□□□ 1.94
AFAP1Q8N556 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
AFAP1Q8N556 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
AFAP1Q8N556 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 CD9-202ENST00000382515 1229 ntTSL 5 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 ALG1L5P-201ENST00000482043 771 ntBASIC27.18■■□□□ 1.94
AFAP1Q8N556 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
AFAP1Q8N556 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 SDCCAG3P1-201ENST00000589292 1150 ntBASIC27.18■■□□□ 1.94
AFAP1Q8N556 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
AFAP1Q8N556 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC27.18■■□□□ 1.94
AFAP1Q8N556 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
AFAP1Q8N556 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 AC007967.3-201ENST00000434308 558 ntBASIC27.17■■□□□ 1.94
AFAP1Q8N556 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 AC005829.1-201ENST00000570002 483 ntBASIC27.17■■□□□ 1.94
AFAP1Q8N556 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 AL022326.1-202ENST00000641533 845 ntBASIC27.17■■□□□ 1.94
AFAP1Q8N556 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 PMPCAP1-201ENST00000508114 1576 ntBASIC27.17■■□□□ 1.94
AFAP1Q8N556 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC27.17■■□□□ 1.94
AFAP1Q8N556 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
AFAP1Q8N556 AL161938.1-201ENST00000569833 2180 ntBASIC27.16■■□□□ 1.94
AFAP1Q8N556 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC27.16■■□□□ 1.94
AFAP1Q8N556 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC27.16■■□□□ 1.94
AFAP1Q8N556 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC27.16■■□□□ 1.94
AFAP1Q8N556 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 58.1 ms