Protein–RNA interactions for Protein: Q8N257

HIST3H2BB, Histone H2B type 3-B, humanhuman

Predictions only

Length 126 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2BBQ8N257 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 AC007322.3-201ENST00000426526 701 ntBASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 CICP13-201ENST00000422015 2789 ntBASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
HIST3H2BBQ8N257 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CASK-202ENST00000378158 3848 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CD72-202ENST00000378430 585 ntTSL 3 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 GPX1-201ENST00000419349 1106 ntBASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PGM5P4-201ENST00000421970 445 ntBASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC13.61□□□□□ -0.23
HIST3H2BBQ8N257 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
HIST3H2BBQ8N257 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms