Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 AC009533.2-201ENST00000543664 586 ntBASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 AC139887.3-201ENST00000568585 713 ntBASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 AL138831.2-201ENST00000606564 490 ntBASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
NPAS3Q8IXF0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 INTS4P1-201ENST00000438455 1935 ntBASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 HNRNPDP1-201ENST00000439535 754 ntBASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 MTCL1P1-201ENST00000446207 792 ntBASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 SCARNA2-201ENST00000458748 420 ntBASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 POLD2P1-201ENST00000511220 997 ntBASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
NPAS3Q8IXF0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.83■□□□□ 0.61
NPAS3Q8IXF0 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
NPAS3Q8IXF0 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS3Q8IXF0 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS3Q8IXF0 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS3Q8IXF0 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
NPAS3Q8IXF0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC18.83■□□□□ 0.61
NPAS3Q8IXF0 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 DANCR-204ENST00000444958 709 ntTSL 3 BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
NPAS3Q8IXF0 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS3Q8IXF0 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS3Q8IXF0 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS3Q8IXF0 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
NPAS3Q8IXF0 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
NPAS3Q8IXF0 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
NPAS3Q8IXF0 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms