Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
KCNA1Q09470 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.06■□□□□ 0.8
KCNA1Q09470 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNA1Q09470 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
KCNA1Q09470 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNA1Q09470 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNA1Q09470 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNA1Q09470 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNA1Q09470 SAPCD2P2-201ENST00000431719 1174 ntBASIC20.05■□□□□ 0.8
KCNA1Q09470 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC20.05■□□□□ 0.8
KCNA1Q09470 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNA1Q09470 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.05■□□□□ 0.8
KCNA1Q09470 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNA1Q09470 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.05■□□□□ 0.8
KCNA1Q09470 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNA1Q09470 AC020763.4-201ENST00000623414 4170 ntBASIC20.05■□□□□ 0.8
KCNA1Q09470 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
KCNA1Q09470 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.05■□□□□ 0.8
KCNA1Q09470 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNA1Q09470 LINC01311-201ENST00000565162 1445 ntBASIC20.04■□□□□ 0.8
KCNA1Q09470 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
KCNA1Q09470 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC20.04■□□□□ 0.8
KCNA1Q09470 NME3-204ENST00000563498 920 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNA1Q09470 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
KCNA1Q09470 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC20.04■□□□□ 0.8
KCNA1Q09470 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.04■□□□□ 0.8
KCNA1Q09470 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
KCNA1Q09470 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
KCNA1Q09470 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC20.03■□□□□ 0.8
KCNA1Q09470 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KCNA1Q09470 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 LY6E-213ENST00000522528 606 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNA1Q09470 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.03■□□□□ 0.8
KCNA1Q09470 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
KCNA1Q09470 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNA1Q09470 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
KCNA1Q09470 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
KCNA1Q09470 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC20.03■□□□□ 0.8
KCNA1Q09470 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.03■□□□□ 0.8
KCNA1Q09470 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
KCNA1Q09470 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
KCNA1Q09470 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.02■□□□□ 0.8
KCNA1Q09470 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
KCNA1Q09470 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 AL031133.1-201ENST00000406807 723 ntBASIC20.02■□□□□ 0.8
KCNA1Q09470 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC20.02■□□□□ 0.8
KCNA1Q09470 AL671277.2-201ENST00000458060 996 ntBASIC20.02■□□□□ 0.8
KCNA1Q09470 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC20.02■□□□□ 0.8
KCNA1Q09470 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.02■□□□□ 0.8
KCNA1Q09470 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
KCNA1Q09470 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
KCNA1Q09470 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
KCNA1Q09470 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 65.2 ms