Protein–RNA interactions for Protein: P57768

SNX16, Sorting nexin-16, humanhuman

Predictions only

Length 344 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16P57768 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
SNX16P57768 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.27■□□□□ 0.68
SNX16P57768 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.27■□□□□ 0.68
SNX16P57768 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.27■□□□□ 0.68
SNX16P57768 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.27■□□□□ 0.68
SNX16P57768 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SNX16P57768 ABALON-201ENST00000629058 1903 ntBASIC19.27■□□□□ 0.67
SNX16P57768 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX16P57768 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.27■□□□□ 0.67
SNX16P57768 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX16P57768 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX16P57768 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
SNX16P57768 AC135050.7-201ENST00000624508 2218 ntBASIC19.27■□□□□ 0.67
SNX16P57768 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SNX16P57768 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
SNX16P57768 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX16P57768 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX16P57768 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
SNX16P57768 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
SNX16P57768 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
SNX16P57768 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC19.26■□□□□ 0.67
SNX16P57768 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
SNX16P57768 RCN1P1-201ENST00000400413 996 ntBASIC19.26■□□□□ 0.67
SNX16P57768 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.26■□□□□ 0.67
SNX16P57768 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX16P57768 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SNX16P57768 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SNX16P57768 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX16P57768 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX16P57768 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.25■□□□□ 0.67
SNX16P57768 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC19.25■□□□□ 0.67
SNX16P57768 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX16P57768 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX16P57768 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.25■□□□□ 0.67
SNX16P57768 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.25■□□□□ 0.67
SNX16P57768 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 AC093677.2-201ENST00000600169 1863 ntBASIC19.25■□□□□ 0.67
SNX16P57768 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC19.25■□□□□ 0.67
SNX16P57768 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.25■□□□□ 0.67
SNX16P57768 LTBR-211ENST00000543190 785 ntTSL 3 BASIC19.25■□□□□ 0.67
SNX16P57768 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 RN7SL850P-201ENST00000579959 291 ntBASIC19.25■□□□□ 0.67
SNX16P57768 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC19.25■□□□□ 0.67
SNX16P57768 AC006011.2-201ENST00000621313 1158 ntBASIC19.25■□□□□ 0.67
SNX16P57768 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
SNX16P57768 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SNX16P57768 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SNX16P57768 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SNX16P57768 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX16P57768 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
SNX16P57768 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.24■□□□□ 0.67
SNX16P57768 KRT89P-201ENST00000620027 1478 ntBASIC19.24■□□□□ 0.67
SNX16P57768 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNX16P57768 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.24■□□□□ 0.67
SNX16P57768 AC104076.2-201ENST00000448912 469 ntBASIC19.24■□□□□ 0.67
SNX16P57768 AC063952.2-201ENST00000498792 1227 ntBASIC19.24■□□□□ 0.67
SNX16P57768 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.24■□□□□ 0.67
SNX16P57768 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.24■□□□□ 0.67
SNX16P57768 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 AL136038.4-201ENST00000603606 1261 ntBASIC19.24■□□□□ 0.67
SNX16P57768 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
SNX16P57768 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
SNX16P57768 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SNX16P57768 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 AL024508.2-201ENST00000607749 1894 ntBASIC19.24■□□□□ 0.67
SNX16P57768 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.24■□□□□ 0.67
SNX16P57768 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SNX16P57768 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms