Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CLDN20P56880 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.75■□□□□ 0.27
CLDN20P56880 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 SNAI3-AS1-205ENST00000568633 2096 ntBASIC16.74■□□□□ 0.27
CLDN20P56880 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN20P56880 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN20P56880 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN20P56880 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC16.74■□□□□ 0.27
CLDN20P56880 FAM8A6P-201ENST00000407496 1135 ntBASIC16.74■□□□□ 0.27
CLDN20P56880 AL359075.1-203ENST00000462729 1002 ntBASIC16.74■□□□□ 0.27
CLDN20P56880 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN20P56880 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN20P56880 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN20P56880 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN20P56880 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.74■□□□□ 0.27
CLDN20P56880 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CLDN20P56880 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.74■□□□□ 0.27
CLDN20P56880 AC034236.2-201ENST00000606662 1610 ntBASIC16.74■□□□□ 0.27
CLDN20P56880 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
CLDN20P56880 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN20P56880 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
CLDN20P56880 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN20P56880 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 GRAMD4P1-201ENST00000435181 1110 ntBASIC16.73■□□□□ 0.27
CLDN20P56880 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.73■□□□□ 0.27
CLDN20P56880 KRT18P38-201ENST00000449496 1282 ntBASIC16.73■□□□□ 0.27
CLDN20P56880 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN20P56880 SEC1P-202ENST00000473944 940 ntBASIC16.73■□□□□ 0.27
CLDN20P56880 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN20P56880 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN20P56880 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.73■□□□□ 0.27
CLDN20P56880 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN20P56880 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN20P56880 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN20P56880 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC16.73■□□□□ 0.27
CLDN20P56880 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC16.73■□□□□ 0.27
CLDN20P56880 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
CLDN20P56880 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
CLDN20P56880 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
CLDN20P56880 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN20P56880 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC16.72■□□□□ 0.27
CLDN20P56880 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN20P56880 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC16.72■□□□□ 0.27
CLDN20P56880 HOMER2P1-201ENST00000455653 964 ntBASIC16.72■□□□□ 0.27
CLDN20P56880 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLDN20P56880 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 LINC01238-205ENST00000567549 1107 ntBASIC16.72■□□□□ 0.27
CLDN20P56880 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC16.72■□□□□ 0.27
CLDN20P56880 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN20P56880 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.72■□□□□ 0.27
CLDN20P56880 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.72■□□□□ 0.27
CLDN20P56880 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN20P56880 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLDN20P56880 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLDN20P56880 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLDN20P56880 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLDN20P56880 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms