Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
AP1S2P56377 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
AP1S2P56377 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.78■□□□□ 0.44
AP1S2P56377 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 FLJ13224-201ENST00000313737 1514 ntBASIC17.77■□□□□ 0.44
AP1S2P56377 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
AP1S2P56377 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC17.77■□□□□ 0.44
AP1S2P56377 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC17.77■□□□□ 0.44
AP1S2P56377 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
AP1S2P56377 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
AP1S2P56377 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.77■□□□□ 0.44
AP1S2P56377 REXO1L9P-201ENST00000604264 2108 ntBASIC17.77■□□□□ 0.44
AP1S2P56377 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.77■□□□□ 0.44
AP1S2P56377 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.77■□□□□ 0.44
AP1S2P56377 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 AC093010.1-201ENST00000473625 1624 ntBASIC17.77■□□□□ 0.44
AP1S2P56377 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
AP1S2P56377 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
AP1S2P56377 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC17.77■□□□□ 0.44
AP1S2P56377 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
AP1S2P56377 AC026471.1-201ENST00000564629 3026 ntBASIC17.77■□□□□ 0.44
AP1S2P56377 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP1S2P56377 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.77■□□□□ 0.43
AP1S2P56377 AC138028.4-201ENST00000564984 1845 ntBASIC17.77■□□□□ 0.43
AP1S2P56377 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
AP1S2P56377 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S2P56377 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.76■□□□□ 0.43
AP1S2P56377 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
AP1S2P56377 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP1S2P56377 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.76■□□□□ 0.43
AP1S2P56377 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
AP1S2P56377 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC17.76■□□□□ 0.43
AP1S2P56377 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 AC005521.1-201ENST00000393351 872 ntBASIC17.76■□□□□ 0.43
AP1S2P56377 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC17.76■□□□□ 0.43
AP1S2P56377 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
AP1S2P56377 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
AP1S2P56377 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
AP1S2P56377 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP1S2P56377 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.76■□□□□ 0.43
AP1S2P56377 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.75■□□□□ 0.43
AP1S2P56377 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
AP1S2P56377 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 AC007613.1-201ENST00000572811 2597 ntBASIC17.75■□□□□ 0.43
AP1S2P56377 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC17.75■□□□□ 0.43
AP1S2P56377 SLC25A6P5-201ENST00000435663 894 ntBASIC17.75■□□□□ 0.43
AP1S2P56377 RASA4DP-201ENST00000460726 1199 ntBASIC17.75■□□□□ 0.43
AP1S2P56377 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
AP1S2P56377 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.75■□□□□ 0.43
AP1S2P56377 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.75■□□□□ 0.43
AP1S2P56377 AL441883.1-201ENST00000566170 1045 ntBASIC17.75■□□□□ 0.43
AP1S2P56377 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
AP1S2P56377 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
AP1S2P56377 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S2P56377 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.75■□□□□ 0.43
AP1S2P56377 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S2P56377 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S2P56377 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S2P56377 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S2P56377 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP1S2P56377 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.75■□□□□ 0.43
AP1S2P56377 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms