Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PMS1P54277 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC20.09■□□□□ 0.81
PMS1P54277 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC20.09■□□□□ 0.81
PMS1P54277 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PMS1P54277 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.08■□□□□ 0.81
PMS1P54277 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PMS1P54277 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PMS1P54277 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
PMS1P54277 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PMS1P54277 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PMS1P54277 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PMS1P54277 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PMS1P54277 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.08■□□□□ 0.81
PMS1P54277 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC20.08■□□□□ 0.81
PMS1P54277 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.08■□□□□ 0.81
PMS1P54277 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC20.08■□□□□ 0.81
PMS1P54277 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
PMS1P54277 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC20.08■□□□□ 0.8
PMS1P54277 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PMS1P54277 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PMS1P54277 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.07■□□□□ 0.8
PMS1P54277 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.07■□□□□ 0.8
PMS1P54277 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
PMS1P54277 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
PMS1P54277 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC20.07■□□□□ 0.8
PMS1P54277 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PMS1P54277 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC20.07■□□□□ 0.8
PMS1P54277 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 HMGA1P5-201ENST00000412453 271 ntBASIC20.07■□□□□ 0.8
PMS1P54277 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
PMS1P54277 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.07■□□□□ 0.8
PMS1P54277 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.07■□□□□ 0.8
PMS1P54277 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.07■□□□□ 0.8
PMS1P54277 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.07■□□□□ 0.8
PMS1P54277 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC20.07■□□□□ 0.8
PMS1P54277 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 GNAS-203ENST00000306120 1878 ntBASIC20.07■□□□□ 0.8
PMS1P54277 LINC01568-207ENST00000641790 1380 ntBASIC20.07■□□□□ 0.8
PMS1P54277 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PMS1P54277 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.07■□□□□ 0.8
PMS1P54277 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PMS1P54277 AC132938.6-201ENST00000623828 1655 ntBASIC20.07■□□□□ 0.8
PMS1P54277 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.06■□□□□ 0.8
PMS1P54277 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.06■□□□□ 0.8
PMS1P54277 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.06■□□□□ 0.8
PMS1P54277 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 EML3-212ENST00000494176 2901 ntTSL 2 BASIC20.06■□□□□ 0.8
PMS1P54277 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
PMS1P54277 EML3-216ENST00000529309 2909 ntTSL 2 BASIC20.06■□□□□ 0.8
PMS1P54277 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PMS1P54277 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.06■□□□□ 0.8
PMS1P54277 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
PMS1P54277 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.06■□□□□ 0.8
PMS1P54277 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PMS1P54277 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC20.06■□□□□ 0.8
PMS1P54277 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms