Protein–RNA interactions for Protein: P51861

CDR1, Cerebellar degeneration-related antigen 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1P51861 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19.97■□□□□ 0.79
CDR1P51861 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.97■□□□□ 0.79
CDR1P51861 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CDR1P51861 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 AL031133.1-201ENST00000406807 723 ntBASIC19.97■□□□□ 0.79
CDR1P51861 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
CDR1P51861 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC19.97■□□□□ 0.79
CDR1P51861 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.97■□□□□ 0.79
CDR1P51861 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.97■□□□□ 0.79
CDR1P51861 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
CDR1P51861 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.97■□□□□ 0.79
CDR1P51861 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.97■□□□□ 0.79
CDR1P51861 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
CDR1P51861 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.97■□□□□ 0.79
CDR1P51861 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC19.97■□□□□ 0.79
CDR1P51861 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
CDR1P51861 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
CDR1P51861 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 FEM1AP3-201ENST00000403722 1741 ntBASIC19.96■□□□□ 0.79
CDR1P51861 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
CDR1P51861 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC19.96■□□□□ 0.79
CDR1P51861 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.96■□□□□ 0.79
CDR1P51861 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 ILF2-202ENST00000368681 726 ntTSL 2 BASIC19.96■□□□□ 0.79
CDR1P51861 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.96■□□□□ 0.79
CDR1P51861 DFFB-212ENST00000625756 649 ntTSL 5 BASIC19.96■□□□□ 0.79
CDR1P51861 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.96■□□□□ 0.79
CDR1P51861 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC19.96■□□□□ 0.79
CDR1P51861 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.96■□□□□ 0.79
CDR1P51861 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
CDR1P51861 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC19.95■□□□□ 0.78
CDR1P51861 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
CDR1P51861 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.95■□□□□ 0.78
CDR1P51861 AC018470.1-201ENST00000624790 3129 ntBASIC19.95■□□□□ 0.78
CDR1P51861 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
CDR1P51861 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.95■□□□□ 0.78
CDR1P51861 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.95■□□□□ 0.78
CDR1P51861 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.95■□□□□ 0.78
CDR1P51861 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 TPM1-226ENST00000560959 925 ntTSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.95■□□□□ 0.78
CDR1P51861 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 PCDHB18P-201ENST00000524813 2368 ntBASIC19.95■□□□□ 0.78
CDR1P51861 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 AL512353.2-201ENST00000448759 1962 ntBASIC19.95■□□□□ 0.78
CDR1P51861 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.95■□□□□ 0.78
CDR1P51861 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
CDR1P51861 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.95■□□□□ 0.78
CDR1P51861 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC19.94■□□□□ 0.78
CDR1P51861 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC19.94■□□□□ 0.78
CDR1P51861 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.94■□□□□ 0.78
CDR1P51861 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 AC135050.7-201ENST00000624508 2218 ntBASIC19.94■□□□□ 0.78
CDR1P51861 FER1L4-210ENST00000615531 5998 ntBASIC19.94■□□□□ 0.78
CDR1P51861 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.94■□□□□ 0.78
CDR1P51861 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
CDR1P51861 SPDYE15P-201ENST00000424157 909 ntBASIC19.94■□□□□ 0.78
CDR1P51861 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.94■□□□□ 0.78
CDR1P51861 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.94■□□□□ 0.78
CDR1P51861 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms