Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.37■□□□□ 0.53
CCNFP41002 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 AL139384.1-201ENST00000612143 3047 ntBASIC18.37■□□□□ 0.53
CCNFP41002 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.37■□□□□ 0.53
CCNFP41002 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC18.37■□□□□ 0.53
CCNFP41002 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.37■□□□□ 0.53
CCNFP41002 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.37■□□□□ 0.53
CCNFP41002 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
CCNFP41002 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCNFP41002 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
CCNFP41002 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
CCNFP41002 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 BUB3-202ENST00000368859 667 ntTSL 3 BASIC18.36■□□□□ 0.53
CCNFP41002 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 SIRPAP1-201ENST00000448467 1770 ntBASIC18.36■□□□□ 0.53
CCNFP41002 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 AC128688.1-201ENST00000487626 519 ntBASIC18.36■□□□□ 0.53
CCNFP41002 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNFP41002 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNFP41002 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNFP41002 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC18.36■□□□□ 0.53
CCNFP41002 AL353719.1-201ENST00000566847 864 ntBASIC18.36■□□□□ 0.53
CCNFP41002 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.36■□□□□ 0.53
CCNFP41002 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
CCNFP41002 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
CCNFP41002 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CCNFP41002 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CCNFP41002 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
CCNFP41002 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.35■□□□□ 0.53
CCNFP41002 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.35■□□□□ 0.53
CCNFP41002 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC18.35■□□□□ 0.53
CCNFP41002 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC18.35■□□□□ 0.53
CCNFP41002 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CCNFP41002 GXYLT1P3-201ENST00000453058 1193 ntBASIC18.35■□□□□ 0.53
CCNFP41002 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
CCNFP41002 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC18.35■□□□□ 0.53
CCNFP41002 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CCNFP41002 PHGDH-209ENST00000641074 1780 ntBASIC18.35■□□□□ 0.53
CCNFP41002 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CCNFP41002 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCNFP41002 GMCL1P1-201ENST00000463439 1581 ntBASIC18.34■□□□□ 0.53
CCNFP41002 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCNFP41002 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 MIR564-202ENST00000385049 94 ntBASIC18.34■□□□□ 0.53
CCNFP41002 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.34■□□□□ 0.53
CCNFP41002 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.34■□□□□ 0.53
CCNFP41002 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC18.34■□□□□ 0.53
CCNFP41002 AC008622.2-201ENST00000617006 1229 ntBASIC18.34■□□□□ 0.53
CCNFP41002 AC010653.2-201ENST00000623505 997 ntBASIC18.34■□□□□ 0.53
CCNFP41002 AC073912.3-201ENST00000624414 853 ntBASIC18.34■□□□□ 0.53
CCNFP41002 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CCNFP41002 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.34■□□□□ 0.53
CCNFP41002 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CCNFP41002 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CCNFP41002 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
CCNFP41002 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC18.34■□□□□ 0.53
CCNFP41002 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CCNFP41002 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms