Protein–RNA interactions for Protein: P35908

KRT2, Keratin, type II cytoskeletal 2 epidermal, humanhuman

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT2P35908 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT2P35908 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT2P35908 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
KRT2P35908 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
KRT2P35908 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
KRT2P35908 AC093010.1-201ENST00000473625 1624 ntBASIC20.93■□□□□ 0.94
KRT2P35908 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC20.93■□□□□ 0.94
KRT2P35908 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 CD276-201ENST00000318424 2738 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT2P35908 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT2P35908 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
KRT2P35908 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT2P35908 HOMER2P1-201ENST00000455653 964 ntBASIC20.92■□□□□ 0.94
KRT2P35908 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC20.92■□□□□ 0.94
KRT2P35908 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.92■□□□□ 0.94
KRT2P35908 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 AL136038.4-201ENST00000603606 1261 ntBASIC20.92■□□□□ 0.94
KRT2P35908 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.92■□□□□ 0.94
KRT2P35908 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC20.92■□□□□ 0.94
KRT2P35908 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
KRT2P35908 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC20.92■□□□□ 0.94
KRT2P35908 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.92■□□□□ 0.94
KRT2P35908 AL391807.1-203ENST00000604392 2365 ntBASIC20.92■□□□□ 0.94
KRT2P35908 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
KRT2P35908 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT2P35908 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
KRT2P35908 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 KIRREL3-AS3-201ENST00000404882 831 ntBASIC20.91■□□□□ 0.94
KRT2P35908 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
KRT2P35908 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KRT2P35908 TMPOP1-202ENST00000424642 1267 ntBASIC20.91■□□□□ 0.94
KRT2P35908 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
KRT2P35908 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT2P35908 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC20.91■□□□□ 0.94
KRT2P35908 KRT18P38-201ENST00000449496 1282 ntBASIC20.91■□□□□ 0.94
KRT2P35908 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.91■□□□□ 0.94
KRT2P35908 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.91■□□□□ 0.94
KRT2P35908 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
KRT2P35908 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KRT2P35908 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT2P35908 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT2P35908 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT2P35908 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 AL359075.1-203ENST00000462729 1002 ntBASIC20.9■□□□□ 0.94
KRT2P35908 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
KRT2P35908 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC20.9■□□□□ 0.94
KRT2P35908 AC008687.5-201ENST00000593746 558 ntBASIC20.9■□□□□ 0.94
KRT2P35908 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.9■□□□□ 0.94
KRT2P35908 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
KRT2P35908 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
KRT2P35908 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
KRT2P35908 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT2P35908 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
KRT2P35908 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
KRT2P35908 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.89■□□□□ 0.94
KRT2P35908 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC20.89■□□□□ 0.94
KRT2P35908 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
KRT2P35908 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.94
KRT2P35908 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms