Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS2P33552 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.45□□□□□ -0.26
CKS2P33552 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
CKS2P33552 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
CKS2P33552 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
CKS2P33552 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
CKS2P33552 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 KRT8-201ENST00000293308 1882 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 PNN-205ENST00000556530 601 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 BANP-227ENST00000626016 2144 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
CKS2P33552 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
CKS2P33552 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 AC011676.5-201ENST00000624864 2660 ntBASIC13.44□□□□□ -0.26
CKS2P33552 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
CKS2P33552 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC13.44□□□□□ -0.26
CKS2P33552 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
CKS2P33552 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC13.43□□□□□ -0.26
CKS2P33552 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 PP12613-201ENST00000424958 2230 ntBASIC13.43□□□□□ -0.26
CKS2P33552 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC13.43□□□□□ -0.26
CKS2P33552 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS2P33552 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC13.43□□□□□ -0.26
CKS2P33552 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS2P33552 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC13.43□□□□□ -0.26
CKS2P33552 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC13.43□□□□□ -0.26
CKS2P33552 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC13.43□□□□□ -0.26
CKS2P33552 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS2P33552 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 NME9-203ENST00000383180 2133 ntTSL 2 BASIC13.43□□□□□ -0.26
CKS2P33552 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
CKS2P33552 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
CKS2P33552 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms