Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A4P31645 AIRN-201ENST00000601203 4374 ntBASIC18.69■□□□□ 0.58
SLC6A4P31645 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A4P31645 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A4P31645 PHGDH-209ENST00000641074 1780 ntBASIC18.69■□□□□ 0.58
SLC6A4P31645 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 IPPK-202ENST00000375522 882 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC6A4P31645 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A4P31645 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC6A4P31645 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A4P31645 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
SLC6A4P31645 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC6A4P31645 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC6A4P31645 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC6A4P31645 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.69■□□□□ 0.58
SLC6A4P31645 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC6A4P31645 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC6A4P31645 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
SLC6A4P31645 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.69■□□□□ 0.58
SLC6A4P31645 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A4P31645 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A4P31645 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 TSPY12P-201ENST00000421279 868 ntBASIC18.68■□□□□ 0.58
SLC6A4P31645 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC6A4P31645 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC6A4P31645 AP000867.3-201ENST00000524675 377 ntBASIC18.68■□□□□ 0.58
SLC6A4P31645 AP005901.3-202ENST00000581653 237 ntBASIC18.68■□□□□ 0.58
SLC6A4P31645 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC6A4P31645 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A4P31645 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
SLC6A4P31645 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A4P31645 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A4P31645 AC104581.1-202ENST00000635932 2618 ntBASIC18.68■□□□□ 0.58
SLC6A4P31645 AC233702.3-201ENST00000578656 1387 ntBASIC18.68■□□□□ 0.58
SLC6A4P31645 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC6A4P31645 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A4P31645 AC132938.6-201ENST00000623828 1655 ntBASIC18.67■□□□□ 0.58
SLC6A4P31645 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC6A4P31645 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A4P31645 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A4P31645 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 DDT-203ENST00000403754 569 ntTSL 3 BASIC18.67■□□□□ 0.58
SLC6A4P31645 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A4P31645 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.67■□□□□ 0.58
SLC6A4P31645 MIR3652-201ENST00000579335 131 ntBASIC18.67■□□□□ 0.58
SLC6A4P31645 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC6A4P31645 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.67■□□□□ 0.58
SLC6A4P31645 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC6A4P31645 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
SLC6A4P31645 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A4P31645 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A4P31645 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC18.66■□□□□ 0.58
SLC6A4P31645 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC6A4P31645 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
SLC6A4P31645 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC18.66■□□□□ 0.58
SLC6A4P31645 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A4P31645 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms