Protein–RNA interactions for Protein: P18074

ERCC2, TFIIH basal transcription factor complex helicase XPD subunit, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2P18074 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
ERCC2P18074 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ERCC2P18074 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC2P18074 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC2P18074 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
ERCC2P18074 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
ERCC2P18074 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.78■□□□□ 0.6
ERCC2P18074 AC092647.4-201ENST00000457211 535 ntBASIC18.78■□□□□ 0.6
ERCC2P18074 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC2P18074 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.78■□□□□ 0.6
ERCC2P18074 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC2P18074 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC18.78■□□□□ 0.6
ERCC2P18074 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
ERCC2P18074 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ERCC2P18074 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
ERCC2P18074 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
ERCC2P18074 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.77■□□□□ 0.6
ERCC2P18074 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.77■□□□□ 0.6
ERCC2P18074 FAM8A6P-201ENST00000407496 1135 ntBASIC18.77■□□□□ 0.6
ERCC2P18074 HLA-F-220ENST00000434407 884 ntBASIC18.77■□□□□ 0.6
ERCC2P18074 FAM210CP-201ENST00000445714 574 ntBASIC18.77■□□□□ 0.6
ERCC2P18074 AC112907.2-201ENST00000448639 330 ntBASIC18.77■□□□□ 0.6
ERCC2P18074 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 AC022616.7-201ENST00000525383 220 ntBASIC18.77■□□□□ 0.6
ERCC2P18074 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.77■□□□□ 0.6
ERCC2P18074 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.77■□□□□ 0.6
ERCC2P18074 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
ERCC2P18074 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
ERCC2P18074 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
ERCC2P18074 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC2P18074 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC2P18074 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC2P18074 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
ERCC2P18074 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC2P18074 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC2P18074 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC2P18074 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC2P18074 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC2P18074 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC2P18074 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.76■□□□□ 0.59
ERCC2P18074 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.76■□□□□ 0.59
ERCC2P18074 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.76■□□□□ 0.59
ERCC2P18074 HYMAI.1-201ENST00000620949 238 ntBASIC18.76■□□□□ 0.59
ERCC2P18074 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.76■□□□□ 0.59
ERCC2P18074 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC2P18074 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
ERCC2P18074 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
ERCC2P18074 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.76■□□□□ 0.59
ERCC2P18074 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
ERCC2P18074 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC18.75■□□□□ 0.59
ERCC2P18074 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
ERCC2P18074 AC093010.1-201ENST00000473625 1624 ntBASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms