Protein–RNA interactions for Protein: P13521

SCG2, Secretogranin-2, humanhuman

Predictions only

Length 617 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2P13521 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC20.98■□□□□ 0.95
SCG2P13521 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC20.98■□□□□ 0.95
SCG2P13521 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCG2P13521 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC20.98■□□□□ 0.95
SCG2P13521 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
SCG2P13521 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCG2P13521 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SCG2P13521 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC20.98■□□□□ 0.95
SCG2P13521 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SCG2P13521 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC20.97■□□□□ 0.95
SCG2P13521 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.97■□□□□ 0.95
SCG2P13521 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
SCG2P13521 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.97■□□□□ 0.95
SCG2P13521 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.97■□□□□ 0.95
SCG2P13521 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC20.97■□□□□ 0.95
SCG2P13521 UPK3BP1-201ENST00000428678 509 ntBASIC20.97■□□□□ 0.95
SCG2P13521 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.97■□□□□ 0.95
SCG2P13521 RNF126P1-202ENST00000569893 925 ntBASIC20.97■□□□□ 0.95
SCG2P13521 NAA38-203ENST00000575071 553 ntTSL 2 BASIC20.97■□□□□ 0.95
SCG2P13521 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC20.97■□□□□ 0.95
SCG2P13521 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC20.97■□□□□ 0.95
SCG2P13521 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC20.97■□□□□ 0.95
SCG2P13521 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC20.97■□□□□ 0.95
SCG2P13521 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
SCG2P13521 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SCG2P13521 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 LINC00167-201ENST00000530583 1419 ntBASIC20.96■□□□□ 0.95
SCG2P13521 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SCG2P13521 SP100-208ENST00000427101 1922 ntTSL 2 BASIC20.96■□□□□ 0.95
SCG2P13521 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 IGHGP-201ENST00000390555 1178 ntBASIC20.96■□□□□ 0.95
SCG2P13521 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC20.96■□□□□ 0.95
SCG2P13521 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.96■□□□□ 0.95
SCG2P13521 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
SCG2P13521 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.96■□□□□ 0.95
SCG2P13521 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.96■□□□□ 0.95
SCG2P13521 AC005332.1-201ENST00000577698 1310 ntBASIC20.96■□□□□ 0.95
SCG2P13521 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC20.96■□□□□ 0.95
SCG2P13521 REXO1L9P-201ENST00000604264 2108 ntBASIC20.96■□□□□ 0.95
SCG2P13521 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.96■□□□□ 0.95
SCG2P13521 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.96■□□□□ 0.95
SCG2P13521 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.96■□□□□ 0.95
SCG2P13521 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SCG2P13521 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
SCG2P13521 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
SCG2P13521 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
SCG2P13521 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
SCG2P13521 BET1L-202ENST00000332865 533 ntTSL 5 BASIC20.95■□□□□ 0.94
SCG2P13521 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC20.95■□□□□ 0.94
SCG2P13521 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.95■□□□□ 0.94
SCG2P13521 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.95■□□□□ 0.94
SCG2P13521 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.95■□□□□ 0.94
SCG2P13521 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC20.95■□□□□ 0.94
SCG2P13521 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.95■□□□□ 0.94
SCG2P13521 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC20.95■□□□□ 0.94
SCG2P13521 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC20.95■□□□□ 0.94
SCG2P13521 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 AC132938.6-201ENST00000623828 1655 ntBASIC20.95■□□□□ 0.94
SCG2P13521 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC20.95■□□□□ 0.94
SCG2P13521 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC20.95■□□□□ 0.94
SCG2P13521 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SCG2P13521 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.94■□□□□ 0.94
SCG2P13521 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
SCG2P13521 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SCG2P13521 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms