Protein–RNA interactions for Protein: P0C5Y9

H2AFB1, Histone H2A-Bbd type 1, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFB1P0C5Y9 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.76□□□□□ -0.05
H2AFB1P0C5Y9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 SLAIN2-201ENST00000264313 6299 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 NIPA2-204ENST00000398014 3130 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 HEIH-201ENST00000623091 1652 ntBASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 C2orf69P4-201ENST00000565394 541 ntBASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
H2AFB1P0C5Y9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 TRIR-205ENST00000592273 783 ntTSL 3 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 UBE2DNL-204ENST00000602536 740 ntBASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 GCK-209ENST00000616242 2260 ntTSL 5 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 AC099063.4-201ENST00000641099 1602 ntBASIC14.74□□□□□ -0.05
H2AFB1P0C5Y9 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2AFB1P0C5Y9 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
H2AFB1P0C5Y9 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
H2AFB1P0C5Y9 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC14.73□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms