Protein–RNA interactions for Protein: P0C091

FREM3, FRAS1-related extracellular matrix protein 3, humanhuman

Predictions only

Length 2,139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FREM3P0C091 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.57■□□□□ 0.24
FREM3P0C091 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 KRT8P10-201ENST00000450021 1447 ntBASIC16.57■□□□□ 0.24
FREM3P0C091 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 BET1L-206ENST00000486280 665 ntTSL 3 BASIC16.57■□□□□ 0.24
FREM3P0C091 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
FREM3P0C091 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.57■□□□□ 0.24
FREM3P0C091 AC012313.10-201ENST00000623509 926 ntBASIC16.57■□□□□ 0.24
FREM3P0C091 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.57■□□□□ 0.24
FREM3P0C091 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
FREM3P0C091 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.56■□□□□ 0.24
FREM3P0C091 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
FREM3P0C091 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.56■□□□□ 0.24
FREM3P0C091 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.56■□□□□ 0.24
FREM3P0C091 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.56■□□□□ 0.24
FREM3P0C091 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FREM3P0C091 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.56■□□□□ 0.24
FREM3P0C091 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
FREM3P0C091 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.56■□□□□ 0.24
FREM3P0C091 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.56■□□□□ 0.24
FREM3P0C091 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.56■□□□□ 0.24
FREM3P0C091 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
FREM3P0C091 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.56■□□□□ 0.24
FREM3P0C091 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
FREM3P0C091 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.56■□□□□ 0.24
FREM3P0C091 MYLKP1-201ENST00000509077 1580 ntBASIC16.56■□□□□ 0.24
FREM3P0C091 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FREM3P0C091 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
FREM3P0C091 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
FREM3P0C091 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.55■□□□□ 0.24
FREM3P0C091 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
FREM3P0C091 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FREM3P0C091 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 DRAXINP1-201ENST00000437611 948 ntBASIC16.55■□□□□ 0.24
FREM3P0C091 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.55■□□□□ 0.24
FREM3P0C091 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FREM3P0C091 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FREM3P0C091 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 SDHAP2-201ENST00000455183 2001 ntBASIC16.55■□□□□ 0.24
FREM3P0C091 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.55■□□□□ 0.24
FREM3P0C091 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FREM3P0C091 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC16.55■□□□□ 0.24
FREM3P0C091 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC16.55■□□□□ 0.24
FREM3P0C091 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FREM3P0C091 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
FREM3P0C091 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.55■□□□□ 0.24
FREM3P0C091 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
FREM3P0C091 AC073592.3-201ENST00000625118 1834 ntBASIC16.55■□□□□ 0.24
FREM3P0C091 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC16.54■□□□□ 0.24
FREM3P0C091 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms