Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HOXC6P09630 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HOXC6P09630 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.56■□□□□ 0.88
HOXC6P09630 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
HOXC6P09630 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.56■□□□□ 0.88
HOXC6P09630 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC20.56■□□□□ 0.88
HOXC6P09630 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
HOXC6P09630 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.56■□□□□ 0.88
HOXC6P09630 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
HOXC6P09630 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 MYLKP1-201ENST00000509077 1580 ntBASIC20.55■□□□□ 0.88
HOXC6P09630 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 AC104109.2-201ENST00000602919 1418 ntBASIC20.55■□□□□ 0.88
HOXC6P09630 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
HOXC6P09630 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXC6P09630 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.55■□□□□ 0.88
HOXC6P09630 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 FUOM-202ENST00000368551 628 ntTSL 3 BASIC20.55■□□□□ 0.88
HOXC6P09630 RPS2P1-201ENST00000434010 821 ntBASIC20.55■□□□□ 0.88
HOXC6P09630 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 AC034105.1-201ENST00000563488 319 ntBASIC20.55■□□□□ 0.88
HOXC6P09630 HLA-J-201ENST00000462773 1622 ntBASIC20.55■□□□□ 0.88
HOXC6P09630 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
HOXC6P09630 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXC6P09630 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXC6P09630 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXC6P09630 AL591424.1-201ENST00000442569 1213 ntBASIC20.54■□□□□ 0.88
HOXC6P09630 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXC6P09630 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC20.54■□□□□ 0.88
HOXC6P09630 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXC6P09630 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.54■□□□□ 0.88
HOXC6P09630 AL356309.3-201ENST00000624132 1934 ntBASIC20.54■□□□□ 0.88
HOXC6P09630 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.54■□□□□ 0.88
HOXC6P09630 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.54■□□□□ 0.88
HOXC6P09630 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
HOXC6P09630 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
HOXC6P09630 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC20.54■□□□□ 0.88
HOXC6P09630 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 PTN-201ENST00000348225 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC6P09630 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXC6P09630 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HOXC6P09630 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
HOXC6P09630 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXC6P09630 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.53■□□□□ 0.88
HOXC6P09630 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
HOXC6P09630 KRT18P65-201ENST00000439811 1286 ntBASIC20.53■□□□□ 0.88
HOXC6P09630 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC20.53■□□□□ 0.88
HOXC6P09630 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC20.53■□□□□ 0.88
HOXC6P09630 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC20.53■□□□□ 0.88
HOXC6P09630 AC140113.2-201ENST00000604370 208 ntBASIC20.53■□□□□ 0.88
HOXC6P09630 AC025062.2-201ENST00000605477 670 ntBASIC20.53■□□□□ 0.88
HOXC6P09630 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms