Protein–RNA interactions for Protein: O76070

SNCG, Gamma-synuclein, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNCGO76070 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 KRT8P20-201ENST00000423953 1409 ntBASIC12.31□□□□□ -0.44
SNCGO76070 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC12.31□□□□□ -0.44
SNCGO76070 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 AC105265.2-201ENST00000467189 838 ntBASIC12.31□□□□□ -0.44
SNCGO76070 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC12.31□□□□□ -0.44
SNCGO76070 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC12.31□□□□□ -0.44
SNCGO76070 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC12.31□□□□□ -0.44
SNCGO76070 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 LSP1-204ENST00000406638 2640 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
SNCGO76070 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC12.31□□□□□ -0.44
SNCGO76070 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
SNCGO76070 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 MYO16-203ENST00000357550 6779 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 UBALD1-205ENST00000590891 2641 ntBASIC12.3□□□□□ -0.44
SNCGO76070 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 RAPGEF1-201ENST00000372189 6085 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 IRX1P1-201ENST00000438849 1838 ntBASIC12.3□□□□□ -0.44
SNCGO76070 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 AL645608.8-201ENST00000606034 2086 ntBASIC12.3□□□□□ -0.44
SNCGO76070 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC12.3□□□□□ -0.44
SNCGO76070 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC12.3□□□□□ -0.44
SNCGO76070 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 BX842568.3-201ENST00000418104 571 ntBASIC12.3□□□□□ -0.44
SNCGO76070 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 MYLK-202ENST00000354792 7531 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.3□□□□□ -0.44
SNCGO76070 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC12.3□□□□□ -0.44
SNCGO76070 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
SNCGO76070 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
SNCGO76070 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms