Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 AC008040.2-201ENST00000461049 708 ntBASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 RNA5SP413-201ENST00000516373 109 ntBASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 CFL2-205ENST00000555765 632 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 AC108860.2-201ENST00000562760 2183 ntBASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
TRAV5A0A0B4J249 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 AC026366.1-201ENST00000488803 879 ntBASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 KRT18P41-201ENST00000518924 1277 ntBASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 KLF13-207ENST00000560473 489 ntTSL 3 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 CKBP1-201ENST00000565489 1086 ntBASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 AC008622.2-201ENST00000617006 1229 ntBASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 AC011298.2-201ENST00000617989 482 ntBASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
TRAV5A0A0B4J249 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
TRAV5A0A0B4J249 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 AL109659.2-201ENST00000606809 1674 ntBASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 SIRPAP1-201ENST00000448467 1770 ntBASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
TRAV5A0A0B4J249 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC14.2□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms