Protein–RNA interactions for Protein: Q9NZQ3

NCKIPSD, NCK-interacting protein with SH3 domain, humanhuman

Predictions only

Length 722 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSDQ9NZQ3 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 AC116407.4-201ENST00000623319 1061 ntBASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.5■□□□□ 0.55
NCKIPSDQ9NZQ3 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 LTB4R2-202ENST00000528054 3092 ntBASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 AC005332.8-201ENST00000622750 2735 ntBASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 AC034232.1-201ENST00000506026 1064 ntBASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 AC069148.1-201ENST00000608741 768 ntBASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 AL133373.2-201ENST00000623187 2828 ntBASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 AC005332.1-201ENST00000577698 1310 ntBASIC18.49■□□□□ 0.55
NCKIPSDQ9NZQ3 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 AL162741.1-201ENST00000565563 1558 ntBASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 ZNF444P1-201ENST00000559497 298 ntBASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 NOC2LP2-201ENST00000407594 1944 ntBASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 HTR7P1-202ENST00000624664 4411 ntBASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
NCKIPSDQ9NZQ3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
NCKIPSDQ9NZQ3 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms