Protein–RNA interactions for Protein: Q9NP31

SH2D2A, SH2 domain-containing protein 2A, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D2AQ9NP31 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH2D2AQ9NP31 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH2D2AQ9NP31 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH2D2AQ9NP31 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH2D2AQ9NP31 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH2D2AQ9NP31 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH2D2AQ9NP31 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SH2D2AQ9NP31 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 USP49-202ENST00000373010 2446 ntTSL 5 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 TSPY12P-201ENST00000421279 868 ntBASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 LINC00265-3P-201ENST00000447588 903 ntBASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 AC068472.1-201ENST00000474589 881 ntBASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 SKP2-204ENST00000508514 821 ntTSL 3 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 MIR3652-201ENST00000579335 131 ntBASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 AC009154.2-201ENST00000621177 724 ntBASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 LINC00602-201ENST00000629776 2065 ntBASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SH2D2AQ9NP31 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 NUS1P1-201ENST00000446295 882 ntBASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 AC012615.1-201ENST00000565797 1299 ntBASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 AP005901.3-202ENST00000581653 237 ntBASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SH2D2AQ9NP31 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SH2D2AQ9NP31 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms