Protein–RNA interactions for Protein: Q9HCC9

ZFYVE28, Lateral signaling target protein 2 homolog, humanhuman

Predictions only

Length 887 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFYVE28Q9HCC9 AC064836.3-201ENST00000607928 673 ntBASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 MIR1199-201ENST00000621445 119 ntBASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
ZFYVE28Q9HCC9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 CYMP-203ENST00000474680 1263 ntBASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 PGM5P2-202ENST00000637225 1043 ntBASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 LINC01006-201ENST00000333319 2292 ntBASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
ZFYVE28Q9HCC9 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 AL024508.2-201ENST00000607749 1894 ntBASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 MCCD1P2-201ENST00000423228 335 ntBASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 RFPL4AP1-201ENST00000530883 850 ntBASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 AC005593.1-201ENST00000624894 515 ntBASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 AP000867.4-201ENST00000641616 219 ntBASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 LINC00602-201ENST00000629776 2065 ntBASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
ZFYVE28Q9HCC9 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 SLC4A1APP2-201ENST00000424054 1259 ntBASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
ZFYVE28Q9HCC9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 PON3-203ENST00000427422 894 ntTSL 3 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 KRT18P65-201ENST00000439811 1286 ntBASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.77■□□□□ 0.92
ZFYVE28Q9HCC9 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.77■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms