Protein–RNA interactions for Protein: Q9H2C1

LHX5, LIM/homeobox protein Lhx5, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LHX5Q9H2C1 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
LHX5Q9H2C1 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 FLJ13224-201ENST00000313737 1514 ntBASIC19.27■□□□□ 0.68
LHX5Q9H2C1 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 AC113404.2-201ENST00000507884 177 ntBASIC19.27■□□□□ 0.68
LHX5Q9H2C1 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
LHX5Q9H2C1 AC138028.4-201ENST00000564984 1845 ntBASIC19.27■□□□□ 0.68
LHX5Q9H2C1 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC19.27■□□□□ 0.67
LHX5Q9H2C1 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.26■□□□□ 0.67
LHX5Q9H2C1 AC092597.1-201ENST00000487352 616 ntBASIC19.26■□□□□ 0.67
LHX5Q9H2C1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 AC024563.2-201ENST00000603282 481 ntBASIC19.26■□□□□ 0.67
LHX5Q9H2C1 HYMAI.1-201ENST00000620949 238 ntBASIC19.26■□□□□ 0.67
LHX5Q9H2C1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
LHX5Q9H2C1 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
LHX5Q9H2C1 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.24■□□□□ 0.67
LHX5Q9H2C1 HBZP1-201ENST00000354915 429 ntBASIC19.24■□□□□ 0.67
LHX5Q9H2C1 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms