Protein–RNA interactions for Protein: Q9BTD1

SHANK2-AS3, Putative uncharacterized protein SHANK2-AS3, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-AS3Q9BTD1 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 SDHAP2-201ENST00000455183 2001 ntBASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 AC097488.1-201ENST00000507834 756 ntBASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 NUDT16P1-203ENST00000513809 620 ntBASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 PKD1P1-201ENST00000458669 6805 ntBASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 AC036111.1-201ENST00000533973 1582 ntBASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
SHANK2-AS3Q9BTD1 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
SHANK2-AS3Q9BTD1 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.08□□□□□ -0.16
SHANK2-AS3Q9BTD1 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 HOXB1-202ENST00000577092 1414 ntBASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC14.07□□□□□ -0.16
SHANK2-AS3Q9BTD1 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 49 ms