Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
CDCA5Q96FF9 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.31■■□□□ 1
CDCA5Q96FF9 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC21.31■■□□□ 1
CDCA5Q96FF9 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.31■■□□□ 1
CDCA5Q96FF9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CDCA5Q96FF9 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC21.31■■□□□ 1
CDCA5Q96FF9 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC21.3■■□□□ 1
CDCA5Q96FF9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA5Q96FF9 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA5Q96FF9 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDCA5Q96FF9 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCA5Q96FF9 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA5Q96FF9 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
CDCA5Q96FF9 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC21.3■■□□□ 1
CDCA5Q96FF9 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC21.3■■□□□ 1
CDCA5Q96FF9 AC108751.1-201ENST00000490852 363 ntBASIC21.3■■□□□ 1
CDCA5Q96FF9 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC21.3■■□□□ 1
CDCA5Q96FF9 YBX1P5-201ENST00000509441 847 ntBASIC21.3■■□□□ 1
CDCA5Q96FF9 CFL1-202ENST00000524553 860 ntTSL 2 BASIC21.3■■□□□ 1
CDCA5Q96FF9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC21.3■■□□□ 1
CDCA5Q96FF9 SNHG9-202ENST00000564014 471 ntBASIC21.3■■□□□ 1
CDCA5Q96FF9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC21.3■■□□□ 1
CDCA5Q96FF9 AC005829.1-201ENST00000570002 483 ntBASIC21.3■■□□□ 1
CDCA5Q96FF9 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC21.3■■□□□ 1
CDCA5Q96FF9 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC21.3■■□□□ 1
CDCA5Q96FF9 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC21.3■■□□□ 1
CDCA5Q96FF9 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CDCA5Q96FF9 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CDCA5Q96FF9 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC21.29■■□□□ 1
CDCA5Q96FF9 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC21.29■■□□□ 1
CDCA5Q96FF9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC21.29■■□□□ 1
CDCA5Q96FF9 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC21.29■■□□□ 1
CDCA5Q96FF9 ALG1L5P-201ENST00000482043 771 ntBASIC21.29■■□□□ 1
CDCA5Q96FF9 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC21.29■■□□□ 1
CDCA5Q96FF9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC21.29■■□□□ 1
CDCA5Q96FF9 AC005593.1-201ENST00000624894 515 ntBASIC21.29■■□□□ 1
CDCA5Q96FF9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CDCA5Q96FF9 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC21.28■■□□□ 1
CDCA5Q96FF9 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC21.28■■□□□ 1
CDCA5Q96FF9 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.28■■□□□ 1
CDCA5Q96FF9 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC21.28■■□□□ 1
CDCA5Q96FF9 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC21.28■■□□□ 1
CDCA5Q96FF9 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC21.28■■□□□ 1
CDCA5Q96FF9 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC21.28■■□□□ 1
CDCA5Q96FF9 AC112698.1-201ENST00000510299 916 ntBASIC21.28■■□□□ 1
CDCA5Q96FF9 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CDCA5Q96FF9 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC21.28■■□□□ 1
CDCA5Q96FF9 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC21.28■■□□□ 1
CDCA5Q96FF9 MIR4469-201ENST00000583919 79 ntBASIC21.28■■□□□ 1
CDCA5Q96FF9 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 AC079776.2-201ENST00000641154 1609 ntBASIC21.28■■□□□ 1
CDCA5Q96FF9 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC21.28■■□□□ 1
CDCA5Q96FF9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC21.27■■□□□ 1
CDCA5Q96FF9 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 PHF19-201ENST00000312189 836 ntTSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC21.27■■□□□ 1
CDCA5Q96FF9 CD9-202ENST00000382515 1229 ntTSL 5 BASIC21.27■■□□□ 1
CDCA5Q96FF9 AC073621.1-201ENST00000392730 636 ntBASIC21.27■■□□□ 1
CDCA5Q96FF9 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC21.27■■□□□ 1
CDCA5Q96FF9 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC21.27■■□□□ 1
CDCA5Q96FF9 AL022326.1-202ENST00000641533 845 ntBASIC21.27■■□□□ 1
CDCA5Q96FF9 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
CDCA5Q96FF9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CDCA5Q96FF9 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC21.27■■□□□ 1
CDCA5Q96FF9 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.27■□□□□ 0.99
CDCA5Q96FF9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CDCA5Q96FF9 MYLKP1-201ENST00000509077 1580 ntBASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms