Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 SRP19-202ENST00000445150 833 ntTSL 2 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
TRIM43Q96BQ3 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TRIM43Q96BQ3 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM43Q96BQ3 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
TRIM43Q96BQ3 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 AC073621.1-201ENST00000392730 636 ntBASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 AC254562.1-201ENST00000417586 456 ntBASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 AL645939.2-201ENST00000427340 991 ntBASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 AC108751.1-201ENST00000490852 363 ntBASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 AC005593.1-201ENST00000624894 515 ntBASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 AC097374.2-201ENST00000618617 1306 ntBASIC19.76■□□□□ 0.75
TRIM43Q96BQ3 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 AC092865.6-201ENST00000642101 219 ntBASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRIM43Q96BQ3 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 SDCCAG3P1-201ENST00000589292 1150 ntBASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 MIR1199-201ENST00000621445 119 ntBASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TRIM43Q96BQ3 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 AC079776.2-201ENST00000641154 1609 ntBASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC19.73■□□□□ 0.75
TRIM43Q96BQ3 AL035633.1-201ENST00000406139 838 ntBASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms