Protein–RNA interactions for Protein: Q8NDW4

ZNF248, Zinc finger protein 248, humanhuman

Predictions only

Length 579 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248Q8NDW4 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 POM121L3P-201ENST00000419331 1163 ntBASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 BX842568.4-201ENST00000421222 227 ntBASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 Z82202.1-201ENST00000623446 1880 ntBASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 SDHAP1-207ENST00000440850 2000 ntBASIC17.47■□□□□ 0.39
ZNF248Q8NDW4 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 RN7SL606P-201ENST00000472779 293 ntBASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 POLD2P1-201ENST00000511220 997 ntBASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
ZNF248Q8NDW4 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC17.46■□□□□ 0.38
ZNF248Q8NDW4 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.46■□□□□ 0.38
ZNF248Q8NDW4 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
ZNF248Q8NDW4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 ZNHIT1-201ENST00000305105 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 AC011840.4-201ENST00000578471 627 ntBASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 MIR3180-4-201ENST00000582223 153 ntBASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 AL032819.2-201ENST00000624543 2162 ntBASIC17.45■□□□□ 0.38
ZNF248Q8NDW4 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 COX10-202ENST00000429152 875 ntTSL 2 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.44■□□□□ 0.38
ZNF248Q8NDW4 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms