Protein–RNA interactions for Protein: Q53FP2

TMEM35A, Transmembrane protein 35A, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35AQ53FP2 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 RCN1P1-201ENST00000400413 996 ntBASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 FAM8A6P-201ENST00000407496 1135 ntBASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 AL096828.2-201ENST00000567259 1965 ntBASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM35AQ53FP2 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 SPDYE15P-201ENST00000424157 909 ntBASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 AC092647.4-201ENST00000457211 535 ntBASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 RBM42-202ENST00000586618 771 ntTSL 3 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 AL136038.4-201ENST00000603606 1261 ntBASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 KRT89P-201ENST00000620027 1478 ntBASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 AC093010.1-201ENST00000473625 1624 ntBASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC17.36■□□□□ 0.37
TMEM35AQ53FP2 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 AL391807.1-203ENST00000604392 2365 ntBASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 AC104076.2-201ENST00000448912 469 ntBASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM35AQ53FP2 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 58.5 ms