Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH13P55290 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.91■□□□□ 0.46
CDH13P55290 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
CDH13P55290 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH13P55290 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
CDH13P55290 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.9■□□□□ 0.46
CDH13P55290 AL163051.1-201ENST00000569214 1512 ntBASIC17.9■□□□□ 0.46
CDH13P55290 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH13P55290 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.9■□□□□ 0.46
CDH13P55290 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.9■□□□□ 0.46
CDH13P55290 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.9■□□□□ 0.46
CDH13P55290 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH13P55290 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CDH13P55290 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.9■□□□□ 0.46
CDH13P55290 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CDH13P55290 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CDH13P55290 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH13P55290 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH13P55290 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CDH13P55290 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH13P55290 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.89■□□□□ 0.45
CDH13P55290 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.89■□□□□ 0.45
CDH13P55290 AP003041.3-201ENST00000527151 707 ntBASIC17.89■□□□□ 0.45
CDH13P55290 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH13P55290 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH13P55290 AP005242.2-201ENST00000580065 1175 ntBASIC17.89■□□□□ 0.45
CDH13P55290 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.89■□□□□ 0.45
CDH13P55290 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH13P55290 AL023803.3-201ENST00000615559 522 ntBASIC17.89■□□□□ 0.45
CDH13P55290 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CDH13P55290 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.45
CDH13P55290 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.89■□□□□ 0.45
CDH13P55290 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CDH13P55290 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 FLJ13224-201ENST00000313737 1514 ntBASIC17.88■□□□□ 0.45
CDH13P55290 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
CDH13P55290 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH13P55290 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 TSPY7P-201ENST00000431358 1114 ntBASIC17.88■□□□□ 0.45
CDH13P55290 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.88■□□□□ 0.45
CDH13P55290 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 RBM17P1-201ENST00000453646 1190 ntBASIC17.88■□□□□ 0.45
CDH13P55290 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH13P55290 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.88■□□□□ 0.45
CDH13P55290 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.88■□□□□ 0.45
CDH13P55290 LINC00896-202ENST00000609602 2128 ntBASIC17.88■□□□□ 0.45
CDH13P55290 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CDH13P55290 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.88■□□□□ 0.45
CDH13P55290 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms