Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2DP55273 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
CDKN2DP55273 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2DP55273 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2DP55273 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC18.07■□□□□ 0.48
CDKN2DP55273 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2DP55273 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2DP55273 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKN2DP55273 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKN2DP55273 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.07■□□□□ 0.48
CDKN2DP55273 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDKN2DP55273 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CDKN2DP55273 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
CDKN2DP55273 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2DP55273 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2DP55273 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2DP55273 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.07■□□□□ 0.48
CDKN2DP55273 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CDKN2DP55273 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CDKN2DP55273 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 AC134043.2-201ENST00000624206 2238 ntBASIC18.06■□□□□ 0.48
CDKN2DP55273 AC093010.1-201ENST00000473625 1624 ntBASIC18.06■□□□□ 0.48
CDKN2DP55273 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKN2DP55273 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKN2DP55273 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 AC009065.1-201ENST00000564055 1225 ntBASIC18.06■□□□□ 0.48
CDKN2DP55273 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.06■□□□□ 0.48
CDKN2DP55273 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CDKN2DP55273 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.06■□□□□ 0.48
CDKN2DP55273 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CDKN2DP55273 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN2DP55273 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN2DP55273 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
CDKN2DP55273 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.05■□□□□ 0.48
CDKN2DP55273 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKN2DP55273 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.05■□□□□ 0.48
CDKN2DP55273 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
CDKN2DP55273 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN2DP55273 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
CDKN2DP55273 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.05■□□□□ 0.48
CDKN2DP55273 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CDKN2DP55273 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms