Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC113404.2-201ENST00000507884 177 ntBASIC19.75■□□□□ 0.75
TNFSF9P41273 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.75■□□□□ 0.75
TNFSF9P41273 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.75■□□□□ 0.75
TNFSF9P41273 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFSF9P41273 AC092119.3-201ENST00000612618 583 ntBASIC19.75■□□□□ 0.75
TNFSF9P41273 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFSF9P41273 LINC00602-201ENST00000629776 2065 ntBASIC19.75■□□□□ 0.75
TNFSF9P41273 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TNFSF9P41273 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.75■□□□□ 0.75
TNFSF9P41273 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.75■□□□□ 0.75
TNFSF9P41273 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TNFSF9P41273 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.75■□□□□ 0.75
TNFSF9P41273 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
TNFSF9P41273 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF9P41273 CHCHD2P8-201ENST00000429873 447 ntBASIC19.74■□□□□ 0.75
TNFSF9P41273 ATP5G2P1-201ENST00000433580 426 ntBASIC19.74■□□□□ 0.75
TNFSF9P41273 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
TNFSF9P41273 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 MIR3180-1-201ENST00000580374 94 ntBASIC19.74■□□□□ 0.75
TNFSF9P41273 MIR3180-3-201ENST00000584616 94 ntBASIC19.74■□□□□ 0.75
TNFSF9P41273 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
TNFSF9P41273 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
TNFSF9P41273 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
TNFSF9P41273 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF9P41273 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.74■□□□□ 0.75
TNFSF9P41273 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
TNFSF9P41273 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
TNFSF9P41273 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFSF9P41273 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF9P41273 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
TNFSF9P41273 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF9P41273 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
TNFSF9P41273 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.73■□□□□ 0.75
TNFSF9P41273 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC19.73■□□□□ 0.75
TNFSF9P41273 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.73■□□□□ 0.75
TNFSF9P41273 AP002414.4-201ENST00000589764 1148 ntBASIC19.73■□□□□ 0.75
TNFSF9P41273 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.73■□□□□ 0.75
TNFSF9P41273 LINC00167-201ENST00000530583 1419 ntBASIC19.73■□□□□ 0.75
TNFSF9P41273 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF9P41273 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFSF9P41273 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
TNFSF9P41273 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
TNFSF9P41273 AC093677.2-201ENST00000600169 1863 ntBASIC19.73■□□□□ 0.75
TNFSF9P41273 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.73■□□□□ 0.75
TNFSF9P41273 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.73■□□□□ 0.75
TNFSF9P41273 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFSF9P41273 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFSF9P41273 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC19.72■□□□□ 0.75
TNFSF9P41273 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TNFSF9P41273 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.72■□□□□ 0.75
TNFSF9P41273 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.72■□□□□ 0.75
TNFSF9P41273 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 CBFB-203ENST00000561924 584 ntTSL 5 BASIC19.72■□□□□ 0.75
TNFSF9P41273 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TNFSF9P41273 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.72■□□□□ 0.75
TNFSF9P41273 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19.72■□□□□ 0.75
TNFSF9P41273 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
TNFSF9P41273 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TNFSF9P41273 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms