Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCN1P31025 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
LCN1P31025 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC16.93■□□□□ 0.3
LCN1P31025 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 AC010203.1-204ENST00000548782 407 ntBASIC16.93■□□□□ 0.3
LCN1P31025 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 AC024243.1-201ENST00000609234 778 ntBASIC16.93■□□□□ 0.3
LCN1P31025 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 AC018470.1-201ENST00000624790 3129 ntBASIC16.93■□□□□ 0.3
LCN1P31025 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.93■□□□□ 0.3
LCN1P31025 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
LCN1P31025 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LCN1P31025 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LCN1P31025 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
LCN1P31025 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LCN1P31025 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
LCN1P31025 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 ANKRD20A18P-201ENST00000359341 492 ntBASIC16.92■□□□□ 0.3
LCN1P31025 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.92■□□□□ 0.3
LCN1P31025 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
LCN1P31025 GMCL1P1-201ENST00000463439 1581 ntBASIC16.92■□□□□ 0.3
LCN1P31025 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
LCN1P31025 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC16.92■□□□□ 0.3
LCN1P31025 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.92■□□□□ 0.3
LCN1P31025 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC16.92■□□□□ 0.3
LCN1P31025 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LCN1P31025 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
LCN1P31025 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LCN1P31025 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC16.91■□□□□ 0.3
LCN1P31025 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
LCN1P31025 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC16.91■□□□□ 0.3
LCN1P31025 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
LCN1P31025 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
LCN1P31025 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LCN1P31025 SDHAP2-201ENST00000455183 2001 ntBASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms