Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC15.75■□□□□ 0.11
CD40P25942 DDT-206ENST00000430101 573 ntTSL 2 BASIC15.75■□□□□ 0.11
CD40P25942 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 RN7SL606P-201ENST00000472779 293 ntBASIC15.75■□□□□ 0.11
CD40P25942 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC15.75■□□□□ 0.11
CD40P25942 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 GXYLT1P4-201ENST00000613576 1192 ntBASIC15.75■□□□□ 0.11
CD40P25942 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC15.75■□□□□ 0.11
CD40P25942 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC15.75■□□□□ 0.11
CD40P25942 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC15.75■□□□□ 0.11
CD40P25942 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC15.75■□□□□ 0.11
CD40P25942 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CD40P25942 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
CD40P25942 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CD40P25942 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 AC005082.1-201ENST00000413042 2259 ntBASIC15.74■□□□□ 0.11
CD40P25942 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC15.74■□□□□ 0.11
CD40P25942 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC15.74■□□□□ 0.11
CD40P25942 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD40P25942 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC15.74■□□□□ 0.11
CD40P25942 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC15.74■□□□□ 0.11
CD40P25942 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC15.74■□□□□ 0.11
CD40P25942 NUS1P1-201ENST00000446295 882 ntBASIC15.74■□□□□ 0.11
CD40P25942 SKP2-204ENST00000508514 821 ntTSL 3 BASIC15.74■□□□□ 0.11
CD40P25942 PP7080-204ENST00000510714 601 ntTSL 3 BASIC15.74■□□□□ 0.11
CD40P25942 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 SDHD-206ENST00000528182 754 ntTSL 3 BASIC15.74■□□□□ 0.11
CD40P25942 AC012615.1-201ENST00000565797 1299 ntBASIC15.74■□□□□ 0.11
CD40P25942 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC15.74■□□□□ 0.11
CD40P25942 Z69720.1-201ENST00000601483 472 ntBASIC15.74■□□□□ 0.11
CD40P25942 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC15.74■□□□□ 0.11
CD40P25942 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CD40P25942 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC15.74■□□□□ 0.11
CD40P25942 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC15.74■□□□□ 0.11
CD40P25942 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CD40P25942 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.74■□□□□ 0.11
CD40P25942 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.73■□□□□ 0.11
CD40P25942 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.73■□□□□ 0.11
CD40P25942 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
CD40P25942 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD40P25942 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC15.73■□□□□ 0.11
CD40P25942 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC15.73■□□□□ 0.11
CD40P25942 VENTXP7-201ENST00000475503 772 ntBASIC15.73■□□□□ 0.11
CD40P25942 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC15.73■□□□□ 0.11
CD40P25942 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 PNN-202ENST00000553331 656 ntTSL 3 BASIC15.73■□□□□ 0.11
CD40P25942 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
CD40P25942 AL691432.3-201ENST00000621860 400 ntBASIC15.73■□□□□ 0.11
CD40P25942 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD40P25942 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CD40P25942 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC15.73■□□□□ 0.11
CD40P25942 AC233702.3-201ENST00000578656 1387 ntBASIC15.73■□□□□ 0.11
CD40P25942 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CD40P25942 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CD40P25942 CROCCP3-202ENST00000420820 1947 ntBASIC15.72■□□□□ 0.11
CD40P25942 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
CD40P25942 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CD40P25942 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CD40P25942 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CD40P25942 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms