Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC079602.3-201ENST00000623931 403 ntBASIC16.88■□□□□ 0.29
NKX2-2O95096 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC16.88■□□□□ 0.29
NKX2-2O95096 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX2-2O95096 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.88■□□□□ 0.29
NKX2-2O95096 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.88■□□□□ 0.29
NKX2-2O95096 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC16.88■□□□□ 0.29
NKX2-2O95096 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.88■□□□□ 0.29
NKX2-2O95096 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NKX2-2O95096 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NKX2-2O95096 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.87■□□□□ 0.29
NKX2-2O95096 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.87■□□□□ 0.29
NKX2-2O95096 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.87■□□□□ 0.29
NKX2-2O95096 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.87■□□□□ 0.29
NKX2-2O95096 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX2-2O95096 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX2-2O95096 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.87■□□□□ 0.29
NKX2-2O95096 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NKX2-2O95096 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NKX2-2O95096 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
NKX2-2O95096 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 AL391807.1-203ENST00000604392 2365 ntBASIC16.86■□□□□ 0.29
NKX2-2O95096 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.86■□□□□ 0.29
NKX2-2O95096 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NKX2-2O95096 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 AK4P3-201ENST00000418260 669 ntBASIC16.86■□□□□ 0.29
NKX2-2O95096 HOMER2P1-201ENST00000455653 964 ntBASIC16.86■□□□□ 0.29
NKX2-2O95096 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.86■□□□□ 0.29
NKX2-2O95096 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC16.86■□□□□ 0.29
NKX2-2O95096 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 AL136038.4-201ENST00000603606 1261 ntBASIC16.86■□□□□ 0.29
NKX2-2O95096 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.86■□□□□ 0.29
NKX2-2O95096 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NKX2-2O95096 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NKX2-2O95096 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC16.85■□□□□ 0.29
NKX2-2O95096 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-2O95096 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
NKX2-2O95096 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC16.85■□□□□ 0.29
NKX2-2O95096 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
NKX2-2O95096 RCN1P1-201ENST00000400413 996 ntBASIC16.85■□□□□ 0.29
NKX2-2O95096 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NKX2-2O95096 HLA-F-220ENST00000434407 884 ntBASIC16.85■□□□□ 0.29
NKX2-2O95096 AC104076.2-201ENST00000448912 469 ntBASIC16.85■□□□□ 0.29
NKX2-2O95096 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.85■□□□□ 0.29
NKX2-2O95096 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 ARL16-209ENST00000573715 763 ntTSL 3 BASIC16.85■□□□□ 0.29
NKX2-2O95096 ARL16-211ENST00000576135 694 ntTSL 3 BASIC16.85■□□□□ 0.29
NKX2-2O95096 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
NKX2-2O95096 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.85■□□□□ 0.29
NKX2-2O95096 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NKX2-2O95096 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms