Protein–RNA interactions for Protein: O75489

NDUFS3, NADH dehydrogenase [ubiquinone] iron-sulfur protein 3, mitochondrial, humanhuman

Predictions only

Length 264 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS3O75489 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
NDUFS3O75489 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NDUFS3O75489 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 ECEL1P3-201ENST00000427961 737 ntBASIC18.25■□□□□ 0.51
NDUFS3O75489 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.25■□□□□ 0.51
NDUFS3O75489 DUT-205ENST00000558813 769 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.25■□□□□ 0.51
NDUFS3O75489 AC010240.3-201ENST00000607688 395 ntBASIC18.25■□□□□ 0.51
NDUFS3O75489 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 AC073912.3-201ENST00000624414 853 ntBASIC18.25■□□□□ 0.51
NDUFS3O75489 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 AC133561.5-201ENST00000635547 218 ntBASIC18.25■□□□□ 0.51
NDUFS3O75489 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
NDUFS3O75489 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.25■□□□□ 0.51
NDUFS3O75489 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.25■□□□□ 0.51
NDUFS3O75489 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.25■□□□□ 0.51
NDUFS3O75489 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.25■□□□□ 0.51
NDUFS3O75489 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
NDUFS3O75489 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
NDUFS3O75489 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.25■□□□□ 0.51
NDUFS3O75489 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
NDUFS3O75489 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.24■□□□□ 0.51
NDUFS3O75489 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.24■□□□□ 0.51
NDUFS3O75489 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.24■□□□□ 0.51
NDUFS3O75489 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.24■□□□□ 0.51
NDUFS3O75489 AP000523.1-201ENST00000398242 1049 ntBASIC18.24■□□□□ 0.51
NDUFS3O75489 LIN28AP1-201ENST00000429574 405 ntBASIC18.24■□□□□ 0.51
NDUFS3O75489 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.24■□□□□ 0.51
NDUFS3O75489 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.24■□□□□ 0.51
NDUFS3O75489 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.24■□□□□ 0.51
NDUFS3O75489 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.24■□□□□ 0.51
NDUFS3O75489 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
NDUFS3O75489 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
NDUFS3O75489 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
NDUFS3O75489 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFS3O75489 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFS3O75489 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 AC018470.1-201ENST00000624790 3129 ntBASIC18.23■□□□□ 0.51
NDUFS3O75489 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.23■□□□□ 0.51
NDUFS3O75489 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC18.23■□□□□ 0.51
NDUFS3O75489 SEC1P-202ENST00000473944 940 ntBASIC18.23■□□□□ 0.51
NDUFS3O75489 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFS3O75489 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.23■□□□□ 0.51
NDUFS3O75489 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC18.23■□□□□ 0.51
NDUFS3O75489 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.23■□□□□ 0.51
NDUFS3O75489 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NDUFS3O75489 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.5 ms