Protein–RNA interactions for Protein: O75309

CDH16, Cadherin-16, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH16O75309 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
CDH16O75309 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.5■□□□□ 0.55
CDH16O75309 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 KRT18P55-202ENST00000578578 1546 ntBASIC18.49■□□□□ 0.55
CDH16O75309 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH16O75309 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 MIR564-202ENST00000385049 94 ntBASIC18.49■□□□□ 0.55
CDH16O75309 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH16O75309 AC004951.3-201ENST00000418645 1148 ntBASIC18.49■□□□□ 0.55
CDH16O75309 NIFKP9-201ENST00000419265 221 ntBASIC18.49■□□□□ 0.55
CDH16O75309 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH16O75309 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.49■□□□□ 0.55
CDH16O75309 RNA5SP413-201ENST00000516373 109 ntBASIC18.49■□□□□ 0.55
CDH16O75309 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CDH16O75309 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH16O75309 AC008403.3-201ENST00000598924 454 ntBASIC18.49■□□□□ 0.55
CDH16O75309 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.49■□□□□ 0.55
CDH16O75309 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.49■□□□□ 0.55
CDH16O75309 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
CDH16O75309 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
CDH16O75309 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
CDH16O75309 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.49■□□□□ 0.55
CDH16O75309 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CDH16O75309 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC18.49■□□□□ 0.55
CDH16O75309 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.48■□□□□ 0.55
CDH16O75309 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC18.48■□□□□ 0.55
CDH16O75309 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.48■□□□□ 0.55
CDH16O75309 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
CDH16O75309 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
CDH16O75309 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 AD000864.1-201ENST00000624076 2295 ntBASIC18.48■□□□□ 0.55
CDH16O75309 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
CDH16O75309 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
CDH16O75309 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH16O75309 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH16O75309 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH16O75309 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.47■□□□□ 0.55
CDH16O75309 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH16O75309 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH16O75309 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH16O75309 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
CDH16O75309 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.47■□□□□ 0.55
CDH16O75309 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC18.47■□□□□ 0.55
CDH16O75309 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.47■□□□□ 0.55
CDH16O75309 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
CDH16O75309 AC069544.1-201ENST00000609399 999 ntBASIC18.47■□□□□ 0.55
CDH16O75309 AL023806.1-201ENST00000603994 1649 ntBASIC18.47■□□□□ 0.55
CDH16O75309 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 KRT8P50-201ENST00000562022 1438 ntBASIC18.47■□□□□ 0.55
CDH16O75309 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
CDH16O75309 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
CDH16O75309 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC18.46■□□□□ 0.55
CDH16O75309 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH16O75309 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH16O75309 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH16O75309 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
CDH16O75309 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 55.2 ms