Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF13O43567 MIR1238-201ENST00000408483 83 ntBASIC16.68■□□□□ 0.26
RNF13O43567 AL390955.1-201ENST00000428694 934 ntBASIC16.68■□□□□ 0.26
RNF13O43567 SLC25A1P2-201ENST00000430693 912 ntBASIC16.68■□□□□ 0.26
RNF13O43567 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.68■□□□□ 0.26
RNF13O43567 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC16.68■□□□□ 0.26
RNF13O43567 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
RNF13O43567 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RNF13O43567 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RNF13O43567 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RNF13O43567 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.68■□□□□ 0.26
RNF13O43567 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 MYLKP1-201ENST00000509077 1580 ntBASIC16.68■□□□□ 0.26
RNF13O43567 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
RNF13O43567 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
RNF13O43567 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF13O43567 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.67■□□□□ 0.26
RNF13O43567 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RNF13O43567 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF13O43567 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC16.67■□□□□ 0.26
RNF13O43567 CCR12P-201ENST00000446203 998 ntBASIC16.67■□□□□ 0.26
RNF13O43567 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 FITM1-202ENST00000559294 800 ntBASIC16.67■□□□□ 0.26
RNF13O43567 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
RNF13O43567 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.67■□□□□ 0.26
RNF13O43567 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
RNF13O43567 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
RNF13O43567 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
RNF13O43567 AC034236.2-201ENST00000606662 1610 ntBASIC16.67■□□□□ 0.26
RNF13O43567 CCM2-207ENST00000475551 2471 ntAPPRIS ALT2 TSL 2 BASIC16.67■□□□□ 0.26
RNF13O43567 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RNF13O43567 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF13O43567 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
RNF13O43567 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF13O43567 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
RNF13O43567 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF13O43567 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF13O43567 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 PRR31-201ENST00000371629 978 ntTSL 2 BASIC16.66■□□□□ 0.26
RNF13O43567 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC16.66■□□□□ 0.26
RNF13O43567 TSPY17P-201ENST00000450329 467 ntBASIC16.66■□□□□ 0.26
RNF13O43567 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
RNF13O43567 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF13O43567 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF13O43567 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
RNF13O43567 AL355075.4-201ENST00000554988 638 ntBASIC16.66■□□□□ 0.26
RNF13O43567 MIR3180-5-201ENST00000583743 153 ntBASIC16.66■□□□□ 0.26
RNF13O43567 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF13O43567 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
RNF13O43567 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
RNF13O43567 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.66■□□□□ 0.26
RNF13O43567 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC16.65■□□□□ 0.26
RNF13O43567 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.65■□□□□ 0.26
RNF13O43567 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.65■□□□□ 0.26
RNF13O43567 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
RNF13O43567 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.65■□□□□ 0.26
RNF13O43567 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms