Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
NDUFS4O43181 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
NDUFS4O43181 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.53■□□□□ 0.4
NDUFS4O43181 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFS4O43181 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
NDUFS4O43181 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
NDUFS4O43181 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.52■□□□□ 0.4
NDUFS4O43181 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.52■□□□□ 0.4
NDUFS4O43181 LTBR-211ENST00000543190 785 ntTSL 3 BASIC17.52■□□□□ 0.4
NDUFS4O43181 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.52■□□□□ 0.4
NDUFS4O43181 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFS4O43181 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.52■□□□□ 0.4
NDUFS4O43181 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NDUFS4O43181 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFS4O43181 GMCL1P1-201ENST00000463439 1581 ntBASIC17.52■□□□□ 0.39
NDUFS4O43181 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.39
NDUFS4O43181 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFS4O43181 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
NDUFS4O43181 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.39
NDUFS4O43181 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.52■□□□□ 0.39
NDUFS4O43181 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS4O43181 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NDUFS4O43181 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 ESPNP-201ENST00000270691 2015 ntBASIC17.51■□□□□ 0.39
NDUFS4O43181 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 FAM8A6P-201ENST00000407496 1135 ntBASIC17.51■□□□□ 0.39
NDUFS4O43181 AL354751.1-201ENST00000412768 1863 ntBASIC17.51■□□□□ 0.39
NDUFS4O43181 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC17.51■□□□□ 0.39
NDUFS4O43181 PVRIG2P-201ENST00000435460 978 ntBASIC17.51■□□□□ 0.39
NDUFS4O43181 AC112907.2-201ENST00000448639 330 ntBASIC17.51■□□□□ 0.39
NDUFS4O43181 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.51■□□□□ 0.39
NDUFS4O43181 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
NDUFS4O43181 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC17.51■□□□□ 0.39
NDUFS4O43181 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
NDUFS4O43181 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFS4O43181 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NDUFS4O43181 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.51■□□□□ 0.39
NDUFS4O43181 AC135776.1-201ENST00000319817 2481 ntBASIC17.5■□□□□ 0.39
NDUFS4O43181 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS4O43181 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS4O43181 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS4O43181 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.5■□□□□ 0.39
NDUFS4O43181 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NDUFS4O43181 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFS4O43181 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.5■□□□□ 0.39
NDUFS4O43181 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
NDUFS4O43181 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NDUFS4O43181 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NDUFS4O43181 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NDUFS4O43181 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC17.5■□□□□ 0.39
NDUFS4O43181 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NDUFS4O43181 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
NDUFS4O43181 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
NDUFS4O43181 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms