Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC17.56■□□□□ 0.4
CDX4O14627 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC17.56■□□□□ 0.4
CDX4O14627 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CDX4O14627 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.56■□□□□ 0.4
CDX4O14627 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC17.56■□□□□ 0.4
CDX4O14627 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CDX4O14627 KRT18P27-201ENST00000427733 1299 ntBASIC17.56■□□□□ 0.4
CDX4O14627 MIR4469-201ENST00000583919 79 ntBASIC17.56■□□□□ 0.4
CDX4O14627 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC17.56■□□□□ 0.4
CDX4O14627 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.56■□□□□ 0.4
CDX4O14627 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.56■□□□□ 0.4
CDX4O14627 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC17.56■□□□□ 0.4
CDX4O14627 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CDX4O14627 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.55■□□□□ 0.4
CDX4O14627 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC17.55■□□□□ 0.4
CDX4O14627 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC17.55■□□□□ 0.4
CDX4O14627 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDX4O14627 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 CD9-202ENST00000382515 1229 ntTSL 5 BASIC17.55■□□□□ 0.4
CDX4O14627 AC254562.1-201ENST00000417586 456 ntBASIC17.55■□□□□ 0.4
CDX4O14627 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC17.55■□□□□ 0.4
CDX4O14627 AC092364.2-202ENST00000597012 1073 ntBASIC17.55■□□□□ 0.4
CDX4O14627 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.55■□□□□ 0.4
CDX4O14627 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDX4O14627 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
CDX4O14627 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CDX4O14627 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CDX4O14627 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.54■□□□□ 0.4
CDX4O14627 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC17.54■□□□□ 0.4
CDX4O14627 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 AC073621.1-201ENST00000392730 636 ntBASIC17.54■□□□□ 0.4
CDX4O14627 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC17.54■□□□□ 0.4
CDX4O14627 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC17.54■□□□□ 0.4
CDX4O14627 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC17.54■□□□□ 0.4
CDX4O14627 BX005266.1-201ENST00000473402 457 ntBASIC17.54■□□□□ 0.4
CDX4O14627 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CDX4O14627 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC17.54■□□□□ 0.4
CDX4O14627 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.54■□□□□ 0.4
CDX4O14627 AC005593.1-201ENST00000624894 515 ntBASIC17.54■□□□□ 0.4
CDX4O14627 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC17.54■□□□□ 0.4
CDX4O14627 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC17.54■□□□□ 0.4
CDX4O14627 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CDX4O14627 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.54■□□□□ 0.4
CDX4O14627 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC17.54■□□□□ 0.4
CDX4O14627 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.54■□□□□ 0.4
CDX4O14627 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CDX4O14627 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC17.54■□□□□ 0.4
CDX4O14627 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX4O14627 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.53■□□□□ 0.4
CDX4O14627 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC17.53■□□□□ 0.4
CDX4O14627 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDX4O14627 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX4O14627 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CDX4O14627 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX4O14627 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX4O14627 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC17.53■□□□□ 0.4
CDX4O14627 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
CDX4O14627 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX4O14627 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.53■□□□□ 0.4
CDX4O14627 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
CDX4O14627 FAM8A3P-201ENST00000427218 844 ntBASIC17.53■□□□□ 0.4
CDX4O14627 AL645939.2-201ENST00000427340 991 ntBASIC17.53■□□□□ 0.4
CDX4O14627 AL669831.5-202ENST00000457084 566 ntTSL 4 BASIC17.53■□□□□ 0.4
CDX4O14627 ALG1L5P-201ENST00000482043 771 ntBASIC17.53■□□□□ 0.4
CDX4O14627 AC108751.1-201ENST00000490852 363 ntBASIC17.53■□□□□ 0.4
CDX4O14627 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC17.53■□□□□ 0.4
CDX4O14627 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC17.53■□□□□ 0.4
CDX4O14627 ETFA-208ENST00000559602 792 ntTSL 3 BASIC17.53■□□□□ 0.4
CDX4O14627 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
CDX4O14627 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC17.53■□□□□ 0.4
CDX4O14627 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC17.53■□□□□ 0.4
CDX4O14627 MIR1199-201ENST00000621445 119 ntBASIC17.53■□□□□ 0.4
CDX4O14627 PGM5P2-202ENST00000637225 1043 ntBASIC17.53■□□□□ 0.4
CDX4O14627 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CDX4O14627 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CDX4O14627 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms