Protein–RNA interactions for Protein: O00483

NDUFA4, Cytochrome c oxidase subunit NDUFA4, humanhuman

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA4O00483 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.04□□□□□ -0.16
NDUFA4O00483 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.04□□□□□ -0.16
NDUFA4O00483 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 PVRIG2P-201ENST00000435460 978 ntBASIC14.04□□□□□ -0.16
NDUFA4O00483 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFA4O00483 GCSHP2-201ENST00000560971 527 ntBASIC14.04□□□□□ -0.16
NDUFA4O00483 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
NDUFA4O00483 P4HB-223ENST00000576390 439 ntTSL 4 BASIC14.04□□□□□ -0.16
NDUFA4O00483 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NDUFA4O00483 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC14.04□□□□□ -0.16
NDUFA4O00483 AL023973.1-201ENST00000624619 620 ntBASIC14.04□□□□□ -0.16
NDUFA4O00483 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
NDUFA4O00483 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFA4O00483 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
NDUFA4O00483 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA4O00483 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFA4O00483 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.04□□□□□ -0.16
NDUFA4O00483 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
NDUFA4O00483 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
NDUFA4O00483 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.03□□□□□ -0.16
NDUFA4O00483 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 AC005521.1-201ENST00000393351 872 ntBASIC14.03□□□□□ -0.16
NDUFA4O00483 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 CD81-212ENST00000526072 1172 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.03□□□□□ -0.16
NDUFA4O00483 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.03□□□□□ -0.16
NDUFA4O00483 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
NDUFA4O00483 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
NDUFA4O00483 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC14.03□□□□□ -0.16
NDUFA4O00483 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFA4O00483 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
NDUFA4O00483 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.16
NDUFA4O00483 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFA4O00483 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFA4O00483 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
NDUFA4O00483 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC14.02□□□□□ -0.16
NDUFA4O00483 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
NDUFA4O00483 AC073508.3-201ENST00000619697 1419 ntBASIC14.02□□□□□ -0.16
NDUFA4O00483 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.02□□□□□ -0.17
NDUFA4O00483 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
NDUFA4O00483 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.02□□□□□ -0.17
NDUFA4O00483 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.02□□□□□ -0.17
NDUFA4O00483 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC14.02□□□□□ -0.17
NDUFA4O00483 AL157888.1-201ENST00000631930 593 ntBASIC14.02□□□□□ -0.17
NDUFA4O00483 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC14.02□□□□□ -0.17
NDUFA4O00483 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
NDUFA4O00483 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
NDUFA4O00483 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
NDUFA4O00483 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
NDUFA4O00483 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms