Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC16.96■□□□□ 0.3
TNFRSF11BO00300 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFRSF11BO00300 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.96■□□□□ 0.3
TNFRSF11BO00300 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFRSF11BO00300 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
TNFRSF11BO00300 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
TNFRSF11BO00300 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC16.96■□□□□ 0.3
TNFRSF11BO00300 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 SERF2-207ENST00000409614 582 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 RPS2P4-201ENST00000476944 856 ntBASIC16.95■□□□□ 0.3
TNFRSF11BO00300 AC011298.2-201ENST00000617989 482 ntBASIC16.95■□□□□ 0.3
TNFRSF11BO00300 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC16.95■□□□□ 0.3
TNFRSF11BO00300 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 MIR564-202ENST00000385049 94 ntBASIC16.94■□□□□ 0.3
TNFRSF11BO00300 KSR1P1-201ENST00000446298 240 ntBASIC16.94■□□□□ 0.3
TNFRSF11BO00300 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 AC110285.5-201ENST00000611501 352 ntBASIC16.94■□□□□ 0.3
TNFRSF11BO00300 ABBA01031674.1-201ENST00000635145 728 ntBASIC16.94■□□□□ 0.3
TNFRSF11BO00300 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TNFRSF11BO00300 AL645608.8-201ENST00000606034 2086 ntBASIC16.93■□□□□ 0.3
TNFRSF11BO00300 ZBTB4-202ENST00000380599 5866 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 AC124016.1-201ENST00000609552 612 ntBASIC16.93■□□□□ 0.3
TNFRSF11BO00300 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC16.93■□□□□ 0.3
TNFRSF11BO00300 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 FAM207BP-201ENST00000447172 505 ntBASIC16.92■□□□□ 0.3
TNFRSF11BO00300 AC008040.2-201ENST00000461049 708 ntBASIC16.92■□□□□ 0.3
TNFRSF11BO00300 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC16.92■□□□□ 0.3
TNFRSF11BO00300 RNA5SP413-201ENST00000516373 109 ntBASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 50.1 ms