Protein–RNA interactions for Protein: K7ER74

APOC4-APOC2, APOC4-APOC2 readthrough (NMD candidate), humanhuman

Predictions only

Length 178 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4-APOC2K7ER74 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 SEC1P-202ENST00000473944 940 ntBASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 AL512604.3-201ENST00000569583 964 ntBASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 FAM87A-204ENST00000613235 858 ntBASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.84■□□□□ 0.61
APOC4-APOC2K7ER74 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 HLA-DQB1-201ENST00000374943 1656 ntBASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.83■□□□□ 0.61
APOC4-APOC2K7ER74 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 CRAT-202ENST00000393384 973 ntTSL 2 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 KIRREL3-AS3-201ENST00000404882 831 ntBASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 AC009947.2-201ENST00000444014 672 ntBASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 DET1-205ENST00000558413 583 ntTSL 4 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 MNT-208ENST00000575394 606 ntTSL 4 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
APOC4-APOC2K7ER74 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 HMGA1P5-201ENST00000412453 271 ntBASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
APOC4-APOC2K7ER74 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
APOC4-APOC2K7ER74 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms