Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 AC080080.1-201ENST00000625121 2420 ntBASIC19.82■□□□□ 0.76
CCDC66A2RUB6 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 GNAS-203ENST00000306120 1878 ntBASIC19.82■□□□□ 0.76
CCDC66A2RUB6 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC66A2RUB6 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 AL118508.1-201ENST00000613502 2345 ntBASIC19.81■□□□□ 0.76
CCDC66A2RUB6 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 AC026366.1-201ENST00000488803 879 ntBASIC19.81■□□□□ 0.76
CCDC66A2RUB6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 TPR-209ENST00000613151 2478 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 HEIH-201ENST00000623091 1652 ntBASIC19.81■□□□□ 0.76
CCDC66A2RUB6 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC66A2RUB6 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.8■□□□□ 0.76
CCDC66A2RUB6 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 KRT16P5-201ENST00000455284 522 ntBASIC19.8■□□□□ 0.76
CCDC66A2RUB6 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 Z85996.1-201ENST00000494644 937 ntBASIC19.8■□□□□ 0.76
CCDC66A2RUB6 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC66A2RUB6 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC66A2RUB6 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms