Protein–RNA interactions for Protein: A0A0C4DH59

TRBV5-4, T-cell receptor beta variable 5-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-4A0A0C4DH59 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 IGHGP-201ENST00000390555 1178 ntBASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 DAP-202ENST00000432074 1048 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 DUTP2-201ENST00000519164 463 ntBASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV5-4A0A0C4DH59 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 AL136038.3-201ENST00000561909 1096 ntBASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 AL590326.2-201ENST00000625139 305 ntBASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV5-4A0A0C4DH59 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 AP003733.1-201ENST00000491725 852 ntBASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 PPOX-214ENST00000535223 664 ntTSL 3 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 AL121956.5-201ENST00000625261 221 ntBASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV5-4A0A0C4DH59 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.96■□□□□ 0.46
TRBV5-4A0A0C4DH59 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 LINC00602-201ENST00000629776 2065 ntBASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC17.95■□□□□ 0.46
TRBV5-4A0A0C4DH59 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms