Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 ABALON-201ENST00000629058 1903 ntBASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 AC124283.5-201ENST00000624661 1809 ntBASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 AC073592.3-201ENST00000625118 1834 ntBASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 AC004264.1-201ENST00000608354 794 ntBASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 AC008764.6-201ENST00000595909 2069 ntBASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRAV8-6A0A0B4J262 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 YBX1P10-201ENST00000444752 975 ntBASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRAV8-6A0A0B4J262 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-6A0A0B4J262 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC13.49□□□□□ -0.25
TRAV8-6A0A0B4J262 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-6A0A0B4J262 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-6A0A0B4J262 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-6A0A0B4J262 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRAV8-6A0A0B4J262 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms