Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 ABR-217ENST00000572441 563 ntTSL 4 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 GPALPP1-207ENST00000611650 899 ntBASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 CCNC-219ENST00000627680 896 ntTSL 5 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 HLA-A-201ENST00000376802 1334 ntBASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SNX11Q9Y5W9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 TSPY12P-201ENST00000421279 868 ntBASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 SAPCD2P3-201ENST00000455031 850 ntBASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 AC120498.9-201ENST00000339021 3867 ntBASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
SNX11Q9Y5W9 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 Z98044.1-201ENST00000632503 1764 ntBASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 MINOS1P3-201ENST00000457048 203 ntBASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 AF238378.1-201ENST00000526806 358 ntBASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 AC009065.1-201ENST00000564055 1225 ntBASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 AC011840.4-201ENST00000578471 627 ntBASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 AC120114.3-201ENST00000611923 658 ntBASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 REXO1L6P-202ENST00000619970 1078 ntBASIC18.1■□□□□ 0.49
SNX11Q9Y5W9 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 GOLPH3-201ENST00000265070 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 CDV3-207ENST00000508481 661 ntTSL 3 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SNX11Q9Y5W9 AC006538.3-201ENST00000612495 578 ntBASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms