Protein–RNA interactions for Protein: Q9Y5G9

PCDHGA4, Protocadherin gamma-A4, humanhuman

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA4Q9Y5G9 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 AC069148.1-201ENST00000608741 768 ntBASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.1■□□□□ 0.49
PCDHGA4Q9Y5G9 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 KATNBL1P6-202ENST00000562413 1466 ntBASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.09■□□□□ 0.49
PCDHGA4Q9Y5G9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PCDHGA4Q9Y5G9 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 CLN6-214ENST00000636314 442 ntTSL 3 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PCDHGA4Q9Y5G9 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.07■□□□□ 0.48
PCDHGA4Q9Y5G9 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms